PROtein Binding Evaluation PROBE1.0 A webserver to dock two protein molecules

News!!! PRUNE and PROBE score acceptable solution in Capri experiment Round 24, Target 50.

	Upload receptor file (PDB format):   ? Upload ligand file (PDB format):   ? Scoring and Ranking  ?       (Recommended for accelerated performance) Transformation Matrix: ? Format of Transformation Matrix:   FTDock ZDOCK PatchDock GrammX ? Full docking   ? Rotation: 12 degree 15 degree 18 degree 9 degree ?                          convert MSE to MET ? How many complexes do you want? Optional: ?     (in case you want job completion notification through email) Name:       Email: Submit Reset				Sample Submission Help Contact Use PRUNE to obtain a subset of your own docking decoys. Last modified: April 07, 2011.

How to cite:
1.	Mitra, P. & Pal, D. (2011) Using correlated parameters for improved ranking of protein-protein docking decoys. J Comput Chem. 32(5):787-796.   [PubMed]
2.	Mitra, P. & Pal, D. (2011) PRUNE and PROBE - two modular web services for protein-protein docking. Nucleic Acids Res. 39(Web Server Issue):W229-34 [PDF]   [PubMed]

Other servers:	PRUNE	IPAC	IPACdb	dockYard